Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm12501-201ENSMUST00000119163 529 ntBASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Gm11783-201ENSMUST00000119549 885 ntBASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Gm23085-201ENSMUST00000157849 293 ntBASIC13.83□□□□□ -0.2
Usp44Q8C2S0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Gm18065-201ENSMUST00000221395 526 ntBASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Gm13461-201ENSMUST00000120980 662 ntBASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Rps4l-202ENSMUST00000204242 789 ntBASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Gm5363-201ENSMUST00000211927 938 ntBASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Gm10288-201ENSMUST00000084614 537 ntBASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp44Q8C2S0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Gm12579-201ENSMUST00000118040 783 ntBASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Gm10807-201ENSMUST00000177134 795 ntBASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Rubie-203ENSMUST00000227803 2430 ntBASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp44Q8C2S0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms