Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.17■□□□□ 0.18
Usp40Q8BWR4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Gm16397-201ENSMUST00000122201 494 ntBASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Gm45594-201ENSMUST00000211717 241 ntBASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Gm18642-201ENSMUST00000206642 1400 ntBASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp40Q8BWR4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gm11628-201ENSMUST00000117568 171 ntBASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gm24398-201ENSMUST00000157870 109 ntBASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gm20495-201ENSMUST00000173902 235 ntBASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gm29155-201ENSMUST00000185910 269 ntBASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gm37826-201ENSMUST00000195329 322 ntBASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gm19009-201ENSMUST00000223072 823 ntBASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Gm6655-201ENSMUST00000201932 1309 ntBASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Usp40Q8BWR4 Ptprm-203ENSMUST00000224091 3773 ntBASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Gm8146-201ENSMUST00000192106 1847 ntBASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Gm12247-201ENSMUST00000117585 670 ntBASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Gm11675-201ENSMUST00000121873 832 ntBASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp40Q8BWR4 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms