Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm28941-201ENSMUST00000185536 1017 ntBASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm9908-201ENSMUST00000211534 448 ntBASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm6562-201ENSMUST00000221903 464 ntBASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm7171-201ENSMUST00000177413 1349 ntBASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Lsm11Q8BUV6 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Gm12314-201ENSMUST00000118104 538 ntBASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Gm14833-201ENSMUST00000118345 1027 ntBASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Gm5745-201ENSMUST00000183748 313 ntBASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Gm5186-201ENSMUST00000218781 920 ntBASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 AC174797.4-201ENSMUST00000225510 347 ntBASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Gm22058-201ENSMUST00000083393 310 ntBASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm11Q8BUV6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms