Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Gm15549-201ENSMUST00000121595 622 ntBASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Mir7088-201ENSMUST00000184227 86 ntBASIC9.71□□□□□ -0.85
Smg1Q8BKX6 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Smg1Q8BKX6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Gm11540-201ENSMUST00000117457 780 ntBASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Mir6387-201ENSMUST00000184042 108 ntBASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Gm44605-201ENSMUST00000206892 949 ntBASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Gm18621-201ENSMUST00000222677 679 ntBASIC9.71□□□□□ -0.86
Smg1Q8BKX6 AC107711.4-201ENSMUST00000228948 440 ntBASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Smg1Q8BKX6 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Gm20091-201ENSMUST00000179683 189 ntBASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Gm23647-201ENSMUST00000175042 109 ntBASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Rn5s-201ENSMUST00000177555 119 ntBASIC9.7□□□□□ -0.86
Smg1Q8BKX6 n-R5s108-201ENSMUST00000177575 119 ntBASIC9.7□□□□□ -0.86
Smg1Q8BKX6 n-R5s121-201ENSMUST00000177589 119 ntBASIC9.7□□□□□ -0.86
Smg1Q8BKX6 n-R5s146-201ENSMUST00000177889 119 ntBASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Gm22109-201ENSMUST00000177995 119 ntBASIC9.7□□□□□ -0.86
Smg1Q8BKX6 Gm22291-201ENSMUST00000178027 119 ntBASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms