Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Gm21769-201ENSMUST00000211922 111 ntBASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Gm19994-201ENSMUST00000217086 586 ntBASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc40Q8BI79 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Gm15547-201ENSMUST00000122152 333 ntBASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms