Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm26047-201ENSMUST00000157308 113 ntBASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm5523-201ENSMUST00000180415 997 ntBASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm38117-201ENSMUST00000194653 939 ntBASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm26047-202ENSMUST00000198840 115 ntBASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh19Q80TF3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Pcdh19Q80TF3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh19Q80TF3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh19Q80TF3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.65□□□□□ -0.55
Pcdh19Q80TF3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.65□□□□□ -0.55
Pcdh19Q80TF3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh19Q80TF3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm13916-201ENSMUST00000117368 628 ntBASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm15131-201ENSMUST00000119124 595 ntBASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms