Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Gm24891-201ENSMUST00000104391 136 ntBASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Gm14219-201ENSMUST00000120414 288 ntBASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Gm11980-201ENSMUST00000121445 986 ntBASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Gm8018-201ENSMUST00000173536 789 ntBASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Mir7677-201ENSMUST00000184226 67 ntBASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Gm7441-201ENSMUST00000220697 1074 ntBASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf38bQ80SY5 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Gm17831-201ENSMUST00000205579 900 ntBASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Gm270-201ENSMUST00000223010 976 ntBASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms