Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm4294-201ENSMUST00000105169 614 ntBASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm11979-201ENSMUST00000119629 743 ntBASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm25492-201ENSMUST00000157383 129 ntBASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm17192-201ENSMUST00000169031 511 ntBASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm28833-201ENSMUST00000189671 559 ntBASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm44647-201ENSMUST00000207402 428 ntBASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm5468-202ENSMUST00000227851 682 ntBASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx55Q6ZPL9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gm14274-201ENSMUST00000117182 615 ntBASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gm11500-201ENSMUST00000118237 601 ntBASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gm13422-201ENSMUST00000118834 504 ntBASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gm15003-201ENSMUST00000118884 446 ntBASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gm9673-201ENSMUST00000119287 781 ntBASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gm9081-201ENSMUST00000182346 991 ntBASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gm6390-201ENSMUST00000215034 589 ntBASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx55Q6ZPL9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms