Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 CT025618.1-203ENSMUST00000227008 589 ntBASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Gm13600-201ENSMUST00000117949 744 ntBASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Gm14219-201ENSMUST00000120414 288 ntBASIC13.71□□□□□ -0.21
Nup98Q6PFD9 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Gm35960-201ENSMUST00000202712 767 ntBASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Gm7082-201ENSMUST00000209880 969 ntBASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Btrc-209ENSMUST00000224478 2194 ntBASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup98Q6PFD9 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Gm11801-201ENSMUST00000117807 746 ntBASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Gm22442-201ENSMUST00000157256 144 ntBASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Gm34379-201ENSMUST00000195036 290 ntBASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup98Q6PFD9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Gm22379-201ENSMUST00000157480 131 ntBASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Gm43671-201ENSMUST00000200422 433 ntBASIC13.7□□□□□ -0.22
Nup98Q6PFD9 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms