Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Gm18561-201ENSMUST00000206027 804 ntBASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Gm18460-201ENSMUST00000208088 464 ntBASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Gm18514-201ENSMUST00000218980 436 ntBASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm24791-201ENSMUST00000104284 131 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm13351-201ENSMUST00000118087 414 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm12948-201ENSMUST00000119406 682 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm22146-201ENSMUST00000157397 288 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm10807-201ENSMUST00000177134 795 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm18204-201ENSMUST00000209835 793 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Mt1-202ENSMUST00000211807 1085 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm19640-201ENSMUST00000214849 464 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Snrnp40Q6PE01 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Snrnp40Q6PE01 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms