Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Gm11439-201ENSMUST00000118598 409 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Gm11803-201ENSMUST00000119966 444 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Gm14760-201ENSMUST00000121831 999 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Gm37497-201ENSMUST00000195830 798 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Gm18165-201ENSMUST00000217426 928 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Gm6180-201ENSMUST00000065243 498 ntBASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rnf220Q6PDX6 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf220Q6PDX6 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Gm8805-201ENSMUST00000117848 313 ntBASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Gm24196-201ENSMUST00000179161 110 ntBASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Gm8420-201ENSMUST00000097103 598 ntBASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms