Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Mir181d-201ENSMUST00000102383 72 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Gm11560-201ENSMUST00000117567 948 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 AC154848.1-201ENSMUST00000225451 846 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Gm5451-201ENSMUST00000080545 579 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scaf8Q6DID3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm18829-201ENSMUST00000188150 1622 ntBASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm11783-201ENSMUST00000119549 885 ntBASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm13059-201ENSMUST00000119881 398 ntBASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm22379-201ENSMUST00000157480 131 ntBASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm10297-201ENSMUST00000207136 651 ntBASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scaf8Q6DID3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Gm16420-201ENSMUST00000120258 856 ntBASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Gm24248-201ENSMUST00000157321 322 ntBASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Gm8459-201ENSMUST00000162504 760 ntBASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Ap1g1-206ENSMUST00000179104 1096 ntBASIC13.93□□□□□ -0.18
Scaf8Q6DID3 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scaf8Q6DID3 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms