Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
AtmQ62388 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.9□□□□□ -0.66
AtmQ62388 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
AtmQ62388 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.9□□□□□ -0.67
AtmQ62388 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
AtmQ62388 Gm6946-201ENSMUST00000182237 987 ntBASIC10.9□□□□□ -0.67
AtmQ62388 Gm5190-201ENSMUST00000192434 357 ntBASIC10.9□□□□□ -0.67
AtmQ62388 Gm44882-201ENSMUST00000205702 802 ntBASIC10.9□□□□□ -0.67
AtmQ62388 AC103672.1-201ENSMUST00000227502 365 ntBASIC10.9□□□□□ -0.67
AtmQ62388 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
AtmQ62388 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
AtmQ62388 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC10.9□□□□□ -0.67
AtmQ62388 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.9□□□□□ -0.67
AtmQ62388 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.9□□□□□ -0.67
AtmQ62388 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
AtmQ62388 Gm16209-201ENSMUST00000118457 627 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Gm10171-201ENSMUST00000126220 628 ntBASIC10.89□□□□□ -0.67
AtmQ62388 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
AtmQ62388 Gm5291-201ENSMUST00000201965 899 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Gm5996-201ENSMUST00000211110 718 ntBASIC10.89□□□□□ -0.67
AtmQ62388 AC124356.1-201ENSMUST00000221469 698 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
AtmQ62388 Gm10233-201ENSMUST00000089275 628 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
AtmQ62388 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
AtmQ62388 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.89□□□□□ -0.67
AtmQ62388 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Gm25148-201ENSMUST00000104611 123 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
AtmQ62388 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Defa-ps16-201ENSMUST00000121939 171 ntBASIC10.89□□□□□ -0.67
AtmQ62388 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.89□□□□□ -0.67
AtmQ62388 Gm24294-201ENSMUST00000158295 277 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
AtmQ62388 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
AtmQ62388 Gm7833-201ENSMUST00000183288 990 ntBASIC10.89□□□□□ -0.67
AtmQ62388 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.89□□□□□ -0.67
AtmQ62388 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
AtmQ62388 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
AtmQ62388 Gm8268-201ENSMUST00000209683 458 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Id2-203ENSMUST00000222667 958 ntBASIC10.89□□□□□ -0.67
AtmQ62388 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
AtmQ62388 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
AtmQ62388 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.88□□□□□ -0.67
AtmQ62388 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
AtmQ62388 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.88□□□□□ -0.67
AtmQ62388 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.88□□□□□ -0.67
AtmQ62388 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.88□□□□□ -0.67
AtmQ62388 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.88□□□□□ -0.67
AtmQ62388 AC102523.1-201ENSMUST00000228706 1144 ntBASIC10.88□□□□□ -0.67
AtmQ62388 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC10.88□□□□□ -0.67
AtmQ62388 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
AtmQ62388 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.88□□□□□ -0.67
AtmQ62388 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
AtmQ62388 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
AtmQ62388 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
AtmQ62388 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
AtmQ62388 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
AtmQ62388 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
AtmQ62388 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
AtmQ62388 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
AtmQ62388 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms