Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
VcanQ62059 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.78□□□□□ -0.68
VcanQ62059 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Gm22937-201ENSMUST00000103954 131 ntBASIC10.78□□□□□ -0.68
VcanQ62059 Gm23912-201ENSMUST00000104687 87 ntBASIC10.78□□□□□ -0.68
VcanQ62059 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.78□□□□□ -0.68
VcanQ62059 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.78□□□□□ -0.68
VcanQ62059 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.78□□□□□ -0.68
VcanQ62059 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VcanQ62059 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
VcanQ62059 Gm22495-201ENSMUST00000104492 126 ntBASIC10.77□□□□□ -0.68
VcanQ62059 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.77□□□□□ -0.68
VcanQ62059 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC10.77□□□□□ -0.68
VcanQ62059 Gm42821-201ENSMUST00000199771 489 ntBASIC10.77□□□□□ -0.68
VcanQ62059 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VcanQ62059 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
VcanQ62059 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
VcanQ62059 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
VcanQ62059 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
VcanQ62059 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VcanQ62059 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.77□□□□□ -0.69
VcanQ62059 Gm13456-201ENSMUST00000118928 1365 ntBASIC10.77□□□□□ -0.69
VcanQ62059 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
VcanQ62059 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
VcanQ62059 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
VcanQ62059 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.77□□□□□ -0.69
VcanQ62059 Gm18504-201ENSMUST00000220917 929 ntBASIC10.77□□□□□ -0.69
VcanQ62059 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
VcanQ62059 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Fam220-ps-201ENSMUST00000116535 783 ntBASIC10.77□□□□□ -0.69
VcanQ62059 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC10.77□□□□□ -0.69
VcanQ62059 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
VcanQ62059 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.77□□□□□ -0.69
VcanQ62059 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.77□□□□□ -0.69
VcanQ62059 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.77□□□□□ -0.69
VcanQ62059 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.77□□□□□ -0.69
VcanQ62059 Gm8643-201ENSMUST00000195228 625 ntBASIC10.77□□□□□ -0.69
VcanQ62059 Gm31274-201ENSMUST00000197356 229 ntBASIC10.77□□□□□ -0.69
VcanQ62059 Gm5178-201ENSMUST00000219380 898 ntBASIC10.77□□□□□ -0.69
VcanQ62059 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.77□□□□□ -0.69
VcanQ62059 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Gm9701-201ENSMUST00000077976 427 ntBASIC10.77□□□□□ -0.69
VcanQ62059 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
VcanQ62059 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Gm38348-201ENSMUST00000191718 2273 ntBASIC10.77□□□□□ -0.69
VcanQ62059 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VcanQ62059 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.76□□□□□ -0.69
VcanQ62059 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
VcanQ62059 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC10.76□□□□□ -0.69
VcanQ62059 Gm27316-201ENSMUST00000184884 277 ntBASIC10.76□□□□□ -0.69
VcanQ62059 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Gm26035-201ENSMUST00000083065 308 ntBASIC10.76□□□□□ -0.69
VcanQ62059 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.76□□□□□ -0.69
VcanQ62059 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
VcanQ62059 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Gm14633-201ENSMUST00000121152 470 ntBASIC10.76□□□□□ -0.69
VcanQ62059 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC10.76□□□□□ -0.69
VcanQ62059 Gm5529-201ENSMUST00000165691 891 ntBASIC10.76□□□□□ -0.69
VcanQ62059 Zfp419-201ENSMUST00000173446 916 ntBASIC10.76□□□□□ -0.69
VcanQ62059 Gm24466-201ENSMUST00000179978 109 ntBASIC10.76□□□□□ -0.69
VcanQ62059 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.76□□□□□ -0.69
VcanQ62059 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.76□□□□□ -0.69
VcanQ62059 Gm18042-201ENSMUST00000219887 790 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms