Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm22902-201ENSMUST00000158488 302 ntBASIC13.99□□□□□ -0.17
Ctr9Q62018 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Gm38117-201ENSMUST00000194653 939 ntBASIC13.99□□□□□ -0.17
Ctr9Q62018 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Gm8959-201ENSMUST00000213150 571 ntBASIC13.99□□□□□ -0.17
Ctr9Q62018 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.99□□□□□ -0.17
Ctr9Q62018 Gm6867-201ENSMUST00000219165 425 ntBASIC13.99□□□□□ -0.17
Ctr9Q62018 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Ginm1-202ENSMUST00000065124 300 ntBASIC13.99□□□□□ -0.17
Ctr9Q62018 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ctr9Q62018 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.99□□□□□ -0.17
Ctr9Q62018 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.99□□□□□ -0.17
Ctr9Q62018 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.98□□□□□ -0.17
Ctr9Q62018 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Ctr9Q62018 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.98□□□□□ -0.17
Ctr9Q62018 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm15207-201ENSMUST00000119259 442 ntBASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm15595-201ENSMUST00000120840 961 ntBASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm9211-201ENSMUST00000182882 975 ntBASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm37835-201ENSMUST00000193305 361 ntBASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm45118-201ENSMUST00000208928 825 ntBASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm2553-201ENSMUST00000215986 605 ntBASIC13.98□□□□□ -0.17
Ctr9Q62018 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.98□□□□□ -0.17
Ctr9Q62018 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Ctr9Q62018 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ctr9Q62018 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctr9Q62018 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ctr9Q62018 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Gm14441-201ENSMUST00000121960 540 ntBASIC13.97□□□□□ -0.17
Ctr9Q62018 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ctr9Q62018 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Ctr9Q62018 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ctr9Q62018 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ctr9Q62018 Gm6905-201ENSMUST00000205729 511 ntBASIC13.97□□□□□ -0.17
Ctr9Q62018 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Ctr9Q62018 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.97□□□□□ -0.17
Ctr9Q62018 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.97□□□□□ -0.17
Ctr9Q62018 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.97□□□□□ -0.17
Ctr9Q62018 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ctr9Q62018 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ctr9Q62018 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ctr9Q62018 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.97□□□□□ -0.17
Ctr9Q62018 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.97□□□□□ -0.17
Ctr9Q62018 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.97□□□□□ -0.17
Ctr9Q62018 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctr9Q62018 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.96□□□□□ -0.17
Ctr9Q62018 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ctr9Q62018 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms