Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Gm45575-201ENSMUST00000210283 548 ntBASIC11.93□□□□□ -0.5
Six4Q61321 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Six4Q61321 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Six4Q61321 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.93□□□□□ -0.5
Six4Q61321 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Six4Q61321 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Six4Q61321 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Gm13035-201ENSMUST00000117496 342 ntBASIC11.92□□□□□ -0.5
Six4Q61321 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Six4Q61321 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Gm4482-201ENSMUST00000200876 742 ntBASIC11.92□□□□□ -0.5
Six4Q61321 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.92□□□□□ -0.5
Six4Q61321 Rps4l-202ENSMUST00000204242 789 ntBASIC11.92□□□□□ -0.5
Six4Q61321 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Gm6867-201ENSMUST00000219165 425 ntBASIC11.92□□□□□ -0.5
Six4Q61321 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.92□□□□□ -0.5
Six4Q61321 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.92□□□□□ -0.5
Six4Q61321 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.92□□□□□ -0.5
Six4Q61321 Paupar-201ENSMUST00000194826 3482 ntBASIC11.92□□□□□ -0.5
Six4Q61321 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six4Q61321 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.92□□□□□ -0.5
Six4Q61321 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Six4Q61321 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six4Q61321 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Six4Q61321 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Six4Q61321 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.91□□□□□ -0.5
Six4Q61321 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.91□□□□□ -0.5
Six4Q61321 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Six4Q61321 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Six4Q61321 Gm14058-201ENSMUST00000116082 735 ntBASIC11.91□□□□□ -0.5
Six4Q61321 Gm13461-201ENSMUST00000120980 662 ntBASIC11.91□□□□□ -0.5
Six4Q61321 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.91□□□□□ -0.5
Six4Q61321 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.91□□□□□ -0.5
Six4Q61321 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.91□□□□□ -0.5
Six4Q61321 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.91□□□□□ -0.5
Six4Q61321 Gm5714-201ENSMUST00000197343 566 ntBASIC11.91□□□□□ -0.5
Six4Q61321 Gm2965-201ENSMUST00000198365 343 ntBASIC11.91□□□□□ -0.5
Six4Q61321 Gm45113-201ENSMUST00000207518 165 ntBASIC11.91□□□□□ -0.5
Six4Q61321 Gm7848-201ENSMUST00000210739 718 ntBASIC11.91□□□□□ -0.5
Six4Q61321 Gm7940-201ENSMUST00000218195 769 ntBASIC11.91□□□□□ -0.5
Six4Q61321 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms