Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.65□□□□□ -0.38
Foxd4Q60688 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Foxd4Q60688 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Foxd4Q60688 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Foxd4Q60688 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.65□□□□□ -0.38
Foxd4Q60688 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.65□□□□□ -0.38
Foxd4Q60688 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Foxd4Q60688 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.65□□□□□ -0.38
Foxd4Q60688 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Foxd4Q60688 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Foxd4Q60688 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.65□□□□□ -0.38
Foxd4Q60688 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.65□□□□□ -0.38
Foxd4Q60688 Gm13341-201ENSMUST00000120780 672 ntBASIC12.65□□□□□ -0.38
Foxd4Q60688 Gm15529-201ENSMUST00000121833 994 ntBASIC12.65□□□□□ -0.38
Foxd4Q60688 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.65□□□□□ -0.38
Foxd4Q60688 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.65□□□□□ -0.38
Foxd4Q60688 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Gm38341-201ENSMUST00000195357 515 ntBASIC12.65□□□□□ -0.38
Foxd4Q60688 Trdv3-201ENSMUST00000198551 309 ntBASIC12.65□□□□□ -0.38
Foxd4Q60688 Gm43818-201ENSMUST00000200605 466 ntBASIC12.65□□□□□ -0.38
Foxd4Q60688 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.65□□□□□ -0.38
Foxd4Q60688 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.65□□□□□ -0.38
Foxd4Q60688 CT025523.1-201ENSMUST00000228318 694 ntBASIC12.65□□□□□ -0.38
Foxd4Q60688 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Foxd4Q60688 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.65□□□□□ -0.38
Foxd4Q60688 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.65□□□□□ -0.38
Foxd4Q60688 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Foxd4Q60688 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Foxd4Q60688 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Foxd4Q60688 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Foxd4Q60688 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC12.65□□□□□ -0.39
Foxd4Q60688 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Foxd4Q60688 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.65□□□□□ -0.39
Foxd4Q60688 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.64□□□□□ -0.39
Foxd4Q60688 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Foxd4Q60688 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.64□□□□□ -0.39
Foxd4Q60688 Gm9164-201ENSMUST00000118700 1014 ntBASIC12.64□□□□□ -0.39
Foxd4Q60688 Gm12291-201ENSMUST00000121627 311 ntBASIC12.64□□□□□ -0.39
Foxd4Q60688 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC12.64□□□□□ -0.39
Foxd4Q60688 Mir3473a-201ENSMUST00000175011 78 ntBASIC12.64□□□□□ -0.39
Foxd4Q60688 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.64□□□□□ -0.39
Foxd4Q60688 V1rg10-201ENSMUST00000183378 937 ntBASIC12.64□□□□□ -0.39
Foxd4Q60688 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Foxd4Q60688 Gm43947-201ENSMUST00000203019 959 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms