Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Gm11930-201ENSMUST00000117788 190 ntBASIC11.69□□□□□ -0.54
Scn2bQ56A07 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Gm25668-201ENSMUST00000157700 129 ntBASIC11.69□□□□□ -0.54
Scn2bQ56A07 Gm27046-201ENSMUST00000182160 463 ntBASIC11.69□□□□□ -0.54
Scn2bQ56A07 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Gm10312-201ENSMUST00000078515 489 ntBASIC11.69□□□□□ -0.54
Scn2bQ56A07 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Scn2bQ56A07 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.69□□□□□ -0.54
Scn2bQ56A07 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn2bQ56A07 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.68□□□□□ -0.54
Scn2bQ56A07 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Gm15610-201ENSMUST00000120584 195 ntBASIC11.68□□□□□ -0.54
Scn2bQ56A07 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.68□□□□□ -0.54
Scn2bQ56A07 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.68□□□□□ -0.54
Scn2bQ56A07 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn2bQ56A07 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms