Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Gm4857-201ENSMUST00000192718 785 ntBASIC12.59□□□□□ -0.39
Syne3Q4FZC9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syne3Q4FZC9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syne3Q4FZC9 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syne3Q4FZC9 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syne3Q4FZC9 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syne3Q4FZC9 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syne3Q4FZC9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Gm15808-201ENSMUST00000119046 604 ntBASIC12.58□□□□□ -0.4
Syne3Q4FZC9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Syne3Q4FZC9 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms