Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Mir7677-201ENSMUST00000184226 67 ntBASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Gm18038-201ENSMUST00000197900 485 ntBASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdkl5Q3UTQ8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkl5Q3UTQ8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkl5Q3UTQ8 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
Cdkl5Q3UTQ8 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkl5Q3UTQ8 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkl5Q3UTQ8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkl5Q3UTQ8 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkl5Q3UTQ8 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkl5Q3UTQ8 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkl5Q3UTQ8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Gm28071-201ENSMUST00000190355 478 ntBASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkl5Q3UTQ8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Gm11960-201ENSMUST00000122068 925 ntBASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Gm37666-201ENSMUST00000194110 866 ntBASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Rps4l-202ENSMUST00000204242 789 ntBASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Gm26448-201ENSMUST00000082446 203 ntBASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Cdkl5Q3UTQ8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms