Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Gm42430-201ENSMUST00000197209 616 ntBASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Gm6653-201ENSMUST00000218063 1288 ntBASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Gm8181-201ENSMUST00000062242 669 ntBASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Arhgef40Q3UPH7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Gng5-ps-201ENSMUST00000120931 205 ntBASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Gm4982-201ENSMUST00000160440 1098 ntBASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Gm34379-201ENSMUST00000195036 290 ntBASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Gm45085-201ENSMUST00000209100 441 ntBASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Smok4a-201ENSMUST00000074512 1455 ntBASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Arhgef40Q3UPH7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm24328-201ENSMUST00000175104 67 ntBASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm28424-201ENSMUST00000187393 1319 ntBASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm44573-201ENSMUST00000191753 2370 ntBASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm9133-201ENSMUST00000118289 540 ntBASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm44216-201ENSMUST00000203942 157 ntBASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Olfr692-202ENSMUST00000217827 1126 ntBASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Arhgef40Q3UPH7 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Arhgef40Q3UPH7 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Arhgef40Q3UPH7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Arhgef40Q3UPH7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms