Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Gm11628-201ENSMUST00000117568 171 ntBASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Gm7150-201ENSMUST00000122032 981 ntBASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Mir8093-201ENSMUST00000185043 137 ntBASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Gm5982-201ENSMUST00000196234 512 ntBASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Gm16166-201ENSMUST00000118291 787 ntBASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Gm13888-201ENSMUST00000119148 422 ntBASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Gm12208-201ENSMUST00000122004 163 ntBASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Gm44980-201ENSMUST00000205826 314 ntBASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Gm2517-201ENSMUST00000215651 348 ntBASIC12.79□□□□□ -0.36
Snx27Q3UHD6 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snx27Q3UHD6 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Gm10807-201ENSMUST00000177134 795 ntBASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Gm23771-201ENSMUST00000178702 110 ntBASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Snora73b-201ENSMUST00000083419 205 ntBASIC12.78□□□□□ -0.36
Snx27Q3UHD6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms