Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 AC117656.2-201ENSMUST00000224931 2215 ntBASIC9.7□□□□□ -0.86
Trim63Q38HM4 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim63Q38HM4 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.69□□□□□ -0.86
Trim63Q38HM4 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Gm38225-201ENSMUST00000194001 393 ntBASIC9.69□□□□□ -0.86
Trim63Q38HM4 Gm42690-201ENSMUST00000197921 1836 ntBASIC9.69□□□□□ -0.86
Trim63Q38HM4 AC084391.1-201ENSMUST00000200651 141 ntBASIC9.69□□□□□ -0.86
Trim63Q38HM4 Gm42741-201ENSMUST00000201340 2278 ntBASIC9.69□□□□□ -0.86
Trim63Q38HM4 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.69□□□□□ -0.86
Trim63Q38HM4 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Gm5425-201ENSMUST00000214125 459 ntBASIC9.69□□□□□ -0.86
Trim63Q38HM4 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.69□□□□□ -0.86
Trim63Q38HM4 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.69□□□□□ -0.86
Trim63Q38HM4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Gm807-202ENSMUST00000224929 408 ntBASIC9.69□□□□□ -0.86
Trim63Q38HM4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC9.69□□□□□ -0.86
Trim63Q38HM4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Dab2-202ENSMUST00000080880 4663 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim63Q38HM4 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm42608-201ENSMUST00000197563 2018 ntBASIC9.68□□□□□ -0.86
Trim63Q38HM4 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.68□□□□□ -0.86
Trim63Q38HM4 AC154849.3-201ENSMUST00000223733 1660 ntBASIC9.68□□□□□ -0.86
Trim63Q38HM4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.68□□□□□ -0.86
Trim63Q38HM4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.68□□□□□ -0.86
Trim63Q38HM4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm28195-201ENSMUST00000186992 372 ntBASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm38144-201ENSMUST00000192790 465 ntBASIC9.68□□□□□ -0.86
Trim63Q38HM4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm15590-201ENSMUST00000078419 552 ntBASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms