Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.38□□□□□ -0.59
Hoxc4Q08624 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Gm12419-201ENSMUST00000116649 636 ntBASIC11.38□□□□□ -0.59
Hoxc4Q08624 Gm11244-201ENSMUST00000121243 237 ntBASIC11.38□□□□□ -0.59
Hoxc4Q08624 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.38□□□□□ -0.59
Hoxc4Q08624 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Mir7076-201ENSMUST00000183519 74 ntBASIC11.38□□□□□ -0.59
Hoxc4Q08624 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Gm37981-201ENSMUST00000194280 535 ntBASIC11.38□□□□□ -0.59
Hoxc4Q08624 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.38□□□□□ -0.59
Hoxc4Q08624 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.38□□□□□ -0.59
Hoxc4Q08624 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.38□□□□□ -0.59
Hoxc4Q08624 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.38□□□□□ -0.59
Hoxc4Q08624 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.38□□□□□ -0.59
Hoxc4Q08624 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxc4Q08624 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm13888-201ENSMUST00000119148 422 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm16071-201ENSMUST00000119589 793 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm12208-201ENSMUST00000122004 163 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm9089-201ENSMUST00000122027 526 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm14665-201ENSMUST00000122294 557 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm22138-201ENSMUST00000158748 128 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm17826-201ENSMUST00000189720 798 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm8574-201ENSMUST00000203207 924 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Gm44545-201ENSMUST00000208262 746 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.37□□□□□ -0.59
Hoxc4Q08624 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxc4Q08624 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxc4Q08624 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.36□□□□□ -0.59
Hoxc4Q08624 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxc4Q08624 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxc4Q08624 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms