Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm7150-201ENSMUST00000122032 981 ntBASIC12.81□□□□□ -0.36
Col9a2Q07643 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Gm7504-201ENSMUST00000201449 424 ntBASIC12.81□□□□□ -0.36
Col9a2Q07643 Gm8574-201ENSMUST00000203207 924 ntBASIC12.81□□□□□ -0.36
Col9a2Q07643 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.81□□□□□ -0.36
Col9a2Q07643 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Gm2553-201ENSMUST00000215986 605 ntBASIC12.81□□□□□ -0.36
Col9a2Q07643 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col9a2Q07643 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Cog3-203ENSMUST00000227473 4197 ntBASIC12.81□□□□□ -0.36
Col9a2Q07643 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Gm11246-201ENSMUST00000120880 345 ntBASIC12.8□□□□□ -0.36
Col9a2Q07643 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Gm20495-201ENSMUST00000173902 235 ntBASIC12.8□□□□□ -0.36
Col9a2Q07643 Gm23045-201ENSMUST00000175041 96 ntBASIC12.8□□□□□ -0.36
Col9a2Q07643 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Gm44506-201ENSMUST00000206278 965 ntBASIC12.8□□□□□ -0.36
Col9a2Q07643 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.8□□□□□ -0.36
Col9a2Q07643 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.8□□□□□ -0.36
Col9a2Q07643 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a2Q07643 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col9a2Q07643 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.79□□□□□ -0.36
Col9a2Q07643 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Col9a2Q07643 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.79□□□□□ -0.36
Col9a2Q07643 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Col9a2Q07643 Gm6485-201ENSMUST00000160676 439 ntBASIC12.79□□□□□ -0.36
Col9a2Q07643 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.79□□□□□ -0.36
Col9a2Q07643 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.79□□□□□ -0.36
Col9a2Q07643 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.79□□□□□ -0.36
Col9a2Q07643 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.79□□□□□ -0.36
Col9a2Q07643 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.79□□□□□ -0.36
Col9a2Q07643 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.79□□□□□ -0.36
Col9a2Q07643 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a2Q07643 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Col9a2Q07643 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Col9a2Q07643 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms