Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.26□□□□□ -0.45
Sox9Q04887 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox9Q04887 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm11500-201ENSMUST00000118237 601 ntBASIC12.26□□□□□ -0.45
Sox9Q04887 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox9Q04887 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox9Q04887 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm7985-201ENSMUST00000183329 981 ntBASIC12.26□□□□□ -0.45
Sox9Q04887 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.26□□□□□ -0.45
Sox9Q04887 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.26□□□□□ -0.45
Sox9Q04887 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.26□□□□□ -0.45
Sox9Q04887 Gm45481-201ENSMUST00000209717 877 ntBASIC12.26□□□□□ -0.45
Sox9Q04887 Gm18041-201ENSMUST00000218210 618 ntBASIC12.26□□□□□ -0.45
Sox9Q04887 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.26□□□□□ -0.45
Sox9Q04887 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Sox9Q04887 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox9Q04887 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox9Q04887 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.26□□□□□ -0.45
Sox9Q04887 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.26□□□□□ -0.45
Sox9Q04887 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Sox9Q04887 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox9Q04887 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Sox9Q04887 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox9Q04887 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox9Q04887 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sox9Q04887 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox9Q04887 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox9Q04887 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox9Q04887 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.25□□□□□ -0.45
Sox9Q04887 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox9Q04887 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox9Q04887 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox9Q04887 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox9Q04887 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Sox9Q04887 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox9Q04887 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox9Q04887 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox9Q04887 Gm23255-201ENSMUST00000102244 110 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox9Q04887 Gm11957-201ENSMUST00000118304 779 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm13445-201ENSMUST00000121664 307 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox9Q04887 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox9Q04887 Gm23400-201ENSMUST00000174994 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm26463-201ENSMUST00000175065 101 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm24332-201ENSMUST00000175102 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm25959-201ENSMUST00000175112 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm22475-201ENSMUST00000175169 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm22903-201ENSMUST00000175193 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm25070-201ENSMUST00000175237 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm24159-201ENSMUST00000175264 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm25299-201ENSMUST00000175283 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm23798-201ENSMUST00000175560 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm23802-201ENSMUST00000175565 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox9Q04887 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Sox9Q04887 Gm25708-201ENSMUST00000177687 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm24370-201ENSMUST00000178007 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm23049-201ENSMUST00000178068 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm28019-201ENSMUST00000178138 101 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm25571-201ENSMUST00000178322 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm25355-201ENSMUST00000178456 101 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm24975-201ENSMUST00000178492 101 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm23189-201ENSMUST00000178954 102 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm25100-201ENSMUST00000179750 101 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm23064-201ENSMUST00000179866 101 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm18776-201ENSMUST00000188833 654 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm43380-201ENSMUST00000200421 220 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm43671-201ENSMUST00000200422 433 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.25□□□□□ -0.45
Sox9Q04887 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms