Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm23931-201ENSMUST00000103842 109 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm14644-201ENSMUST00000116671 647 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm11989-201ENSMUST00000117240 672 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm11362-201ENSMUST00000118838 850 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm11960-201ENSMUST00000122068 925 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Snora78-201ENSMUST00000158630 128 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm9230-201ENSMUST00000188228 532 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.23□□□□□ -0.61
Cxcr5Q04683 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcr5Q04683 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Gm38002-201ENSMUST00000193255 180 ntBASIC11.22□□□□□ -0.61
Cxcr5Q04683 Gm38314-201ENSMUST00000195709 625 ntBASIC11.22□□□□□ -0.61
Cxcr5Q04683 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Gm6013-201ENSMUST00000212264 699 ntBASIC11.22□□□□□ -0.61
Cxcr5Q04683 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.22□□□□□ -0.61
Cxcr5Q04683 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcr5Q04683 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cxcr5Q04683 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcr5Q04683 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cxcr5Q04683 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcr5Q04683 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cxcr5Q04683 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcr5Q04683 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcr5Q04683 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms