Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.24□□□□□ -0.61
Nkx3-2P97503 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm13045-201ENSMUST00000119019 712 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.23□□□□□ -0.61
Nkx3-2P97503 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm3332-201ENSMUST00000189337 928 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm3786-201ENSMUST00000202659 378 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm43947-201ENSMUST00000203019 959 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Nkx3-2P97503 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.23□□□□□ -0.61
Nkx3-2P97503 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx3-2P97503 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx3-2P97503 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Gm12501-201ENSMUST00000119163 529 ntBASIC11.22□□□□□ -0.61
Nkx3-2P97503 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.22□□□□□ -0.61
Nkx3-2P97503 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Gm25881-201ENSMUST00000157783 103 ntBASIC11.22□□□□□ -0.61
Nkx3-2P97503 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx3-2P97503 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Nkx3-2P97503 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Gm2965-201ENSMUST00000198365 343 ntBASIC11.22□□□□□ -0.61
Nkx3-2P97503 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.22□□□□□ -0.61
Nkx3-2P97503 Gm8956-201ENSMUST00000203939 825 ntBASIC11.22□□□□□ -0.61
Nkx3-2P97503 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms