Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.83□□□□□ -0.36
CiitaP79621 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CiitaP79621 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CiitaP79621 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.83□□□□□ -0.36
CiitaP79621 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.83□□□□□ -0.36
CiitaP79621 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.83□□□□□ -0.36
CiitaP79621 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.82□□□□□ -0.36
CiitaP79621 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.82□□□□□ -0.36
CiitaP79621 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CiitaP79621 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Gm15573-201ENSMUST00000119487 540 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CiitaP79621 Gm4726-201ENSMUST00000135604 736 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Gm6019-201ENSMUST00000148369 736 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Gm3150-201ENSMUST00000166418 204 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Mir8115-201ENSMUST00000184992 119 ntBASIC12.82□□□□□ -0.36
CiitaP79621 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Gm38314-201ENSMUST00000195709 625 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Gm35960-201ENSMUST00000202712 767 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CiitaP79621 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.82□□□□□ -0.36
CiitaP79621 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CiitaP79621 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CiitaP79621 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CiitaP79621 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CiitaP79621 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.81□□□□□ -0.36
CiitaP79621 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CiitaP79621 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.81□□□□□ -0.36
CiitaP79621 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CiitaP79621 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CiitaP79621 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Gm18367-201ENSMUST00000176139 600 ntBASIC12.81□□□□□ -0.36
CiitaP79621 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.81□□□□□ -0.36
CiitaP79621 Gm12407-201ENSMUST00000180219 324 ntBASIC12.81□□□□□ -0.36
CiitaP79621 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.81□□□□□ -0.36
CiitaP79621 Gm7467-201ENSMUST00000185173 652 ntBASIC12.81□□□□□ -0.36
CiitaP79621 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.81□□□□□ -0.36
CiitaP79621 Gm44506-201ENSMUST00000206278 965 ntBASIC12.81□□□□□ -0.36
CiitaP79621 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.81□□□□□ -0.36
CiitaP79621 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.81□□□□□ -0.36
CiitaP79621 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.81□□□□□ -0.36
CiitaP79621 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CiitaP79621 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.81□□□□□ -0.36
CiitaP79621 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.81□□□□□ -0.36
CiitaP79621 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CiitaP79621 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms