Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.15□□□□□ -0.46
Msx3P70354 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Msx3P70354 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Msx3P70354 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.15□□□□□ -0.46
Msx3P70354 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.15□□□□□ -0.46
Msx3P70354 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Msx3P70354 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.15□□□□□ -0.46
Msx3P70354 Gm14723-201ENSMUST00000118686 215 ntBASIC12.15□□□□□ -0.46
Msx3P70354 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.15□□□□□ -0.46
Msx3P70354 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Msx3P70354 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.15□□□□□ -0.46
Msx3P70354 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Gm38314-201ENSMUST00000195709 625 ntBASIC12.15□□□□□ -0.46
Msx3P70354 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.15□□□□□ -0.46
Msx3P70354 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.15□□□□□ -0.46
Msx3P70354 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.15□□□□□ -0.46
Msx3P70354 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.15□□□□□ -0.46
Msx3P70354 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.15□□□□□ -0.46
Msx3P70354 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.15□□□□□ -0.46
Msx3P70354 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Msx3P70354 Gm9899-201ENSMUST00000065519 555 ntBASIC12.15□□□□□ -0.46
Msx3P70354 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Msx3P70354 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Msx3P70354 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Msx3P70354 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.15□□□□□ -0.47
Msx3P70354 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Msx3P70354 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Msx3P70354 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Msx3P70354 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Msx3P70354 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Msx3P70354 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Msx3P70354 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.14□□□□□ -0.47
Msx3P70354 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.14□□□□□ -0.47
Msx3P70354 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.14□□□□□ -0.47
Msx3P70354 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.14□□□□□ -0.47
Msx3P70354 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msx3P70354 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms