Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smad1P70340 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.23□□□□□ -0.45
Smad1P70340 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smad1P70340 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.23□□□□□ -0.45
Smad1P70340 Gm23200-201ENSMUST00000104379 132 ntBASIC12.23□□□□□ -0.45
Smad1P70340 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Smad1P70340 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smad1P70340 Gm20426-201ENSMUST00000173657 440 ntBASIC12.23□□□□□ -0.45
Smad1P70340 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smad1P70340 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.23□□□□□ -0.45
Smad1P70340 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Smad1P70340 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.23□□□□□ -0.45
Smad1P70340 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.23□□□□□ -0.45
Smad1P70340 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Smad1P70340 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.22□□□□□ -0.45
Smad1P70340 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smad1P70340 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smad1P70340 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.22□□□□□ -0.45
Smad1P70340 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Smad1P70340 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smad1P70340 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smad1P70340 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.22□□□□□ -0.45
Smad1P70340 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.22□□□□□ -0.45
Smad1P70340 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.22□□□□□ -0.45
Smad1P70340 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.22□□□□□ -0.45
Smad1P70340 Gm24845-201ENSMUST00000158034 109 ntBASIC12.22□□□□□ -0.45
Smad1P70340 Mir1943-201ENSMUST00000158276 73 ntBASIC12.22□□□□□ -0.45
Smad1P70340 Gm25700-201ENSMUST00000177693 110 ntBASIC12.22□□□□□ -0.45
Smad1P70340 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.22□□□□□ -0.45
Smad1P70340 Gm3508-201ENSMUST00000186012 792 ntBASIC12.22□□□□□ -0.45
Smad1P70340 Gm44100-201ENSMUST00000204329 436 ntBASIC12.22□□□□□ -0.45
Smad1P70340 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smad1P70340 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.22□□□□□ -0.45
Smad1P70340 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.22□□□□□ -0.45
Smad1P70340 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smad1P70340 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smad1P70340 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.21□□□□□ -0.45
Smad1P70340 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.21□□□□□ -0.45
Smad1P70340 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.21□□□□□ -0.45
Smad1P70340 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Smad1P70340 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Smad1P70340 Gm24934-201ENSMUST00000103764 111 ntBASIC12.21□□□□□ -0.45
Smad1P70340 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Smad1P70340 Gm13996-201ENSMUST00000118456 430 ntBASIC12.21□□□□□ -0.45
Smad1P70340 Gm12058-201ENSMUST00000118614 437 ntBASIC12.21□□□□□ -0.45
Smad1P70340 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.21□□□□□ -0.45
Smad1P70340 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.21□□□□□ -0.45
Smad1P70340 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.21□□□□□ -0.45
Smad1P70340 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.21□□□□□ -0.45
Smad1P70340 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.21□□□□□ -0.45
Smad1P70340 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smad1P70340 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms