Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
Cux2P70298 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cux2P70298 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cux2P70298 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Cux2P70298 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Cux2P70298 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC19.03■□□□□ 0.64
Cux2P70298 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC19.03■□□□□ 0.64
Cux2P70298 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cux2P70298 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cux2P70298 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cux2P70298 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux2P70298 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
Cux2P70298 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cux2P70298 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cux2P70298 Gm13192-201ENSMUST00000101199 208 ntBASIC19.02■□□□□ 0.64
Cux2P70298 Gm23132-201ENSMUST00000104254 132 ntBASIC19.02■□□□□ 0.64
Cux2P70298 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cux2P70298 Mir1249-201ENSMUST00000116791 98 ntBASIC19.02■□□□□ 0.64
Cux2P70298 Gm10443-201ENSMUST00000119024 210 ntBASIC19.02■□□□□ 0.64
Cux2P70298 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC19.02■□□□□ 0.64
Cux2P70298 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC19.02■□□□□ 0.64
Cux2P70298 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Gm23582-201ENSMUST00000158530 139 ntBASIC19.02■□□□□ 0.64
Cux2P70298 Gm18733-202ENSMUST00000174447 401 ntBASIC19.02■□□□□ 0.64
Cux2P70298 Gm27826-201ENSMUST00000175282 255 ntBASIC19.02■□□□□ 0.64
Cux2P70298 Gm20568-201ENSMUST00000197129 208 ntBASIC19.02■□□□□ 0.64
Cux2P70298 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC19.02■□□□□ 0.64
Cux2P70298 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Cux2P70298 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Cux2P70298 AC117769.1-201ENSMUST00000224716 1120 ntBASIC19.02■□□□□ 0.64
Cux2P70298 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cux2P70298 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Cux2P70298 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Gm37651-201ENSMUST00000194679 1494 ntBASIC19.02■□□□□ 0.64
Cux2P70298 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux2P70298 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Cux2P70298 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cux2P70298 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Gm25394-201ENSMUST00000157338 133 ntBASIC19.01■□□□□ 0.63
Cux2P70298 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Cux2P70298 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC19.01■□□□□ 0.63
Cux2P70298 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC19.01■□□□□ 0.63
Cux2P70298 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cux2P70298 Gm43564-201ENSMUST00000196185 211 ntBASIC19.01■□□□□ 0.63
Cux2P70298 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC19.01■□□□□ 0.63
Cux2P70298 Gm42748-201ENSMUST00000199354 2341 ntBASIC19.01■□□□□ 0.63
Cux2P70298 Gm43866-201ENSMUST00000203894 839 ntBASIC19.01■□□□□ 0.63
Cux2P70298 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC19.01■□□□□ 0.63
Cux2P70298 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC19.01■□□□□ 0.63
Cux2P70298 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cux2P70298 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cux2P70298 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC19.01■□□□□ 0.63
Cux2P70298 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC19.01■□□□□ 0.63
Cux2P70298 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC19.01■□□□□ 0.63
Cux2P70298 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms