Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Six5P70178 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.09□□□□□ -0.63
Six5P70178 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Six5P70178 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Six5P70178 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.09□□□□□ -0.63
Six5P70178 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.09□□□□□ -0.63
Six5P70178 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Six5P70178 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.08□□□□□ -0.63
Six5P70178 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.08□□□□□ -0.64
Six5P70178 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.08□□□□□ -0.64
Six5P70178 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.08□□□□□ -0.64
Six5P70178 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.08□□□□□ -0.64
Six5P70178 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Six5P70178 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Six5P70178 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Six5P70178 Gm23949-201ENSMUST00000104027 127 ntBASIC11.08□□□□□ -0.64
Six5P70178 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Six5P70178 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Six5P70178 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.08□□□□□ -0.64
Six5P70178 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.08□□□□□ -0.64
Six5P70178 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Six5P70178 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.08□□□□□ -0.64
Six5P70178 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.08□□□□□ -0.64
Six5P70178 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Six5P70178 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.08□□□□□ -0.64
Six5P70178 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Six5P70178 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.08□□□□□ -0.64
Six5P70178 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.08□□□□□ -0.64
Six5P70178 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.08□□□□□ -0.64
Six5P70178 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.08□□□□□ -0.64
Six5P70178 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.08□□□□□ -0.64
Six5P70178 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.08□□□□□ -0.64
Six5P70178 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Gm26448-201ENSMUST00000082446 203 ntBASIC11.08□□□□□ -0.64
Six5P70178 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Six5P70178 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Six5P70178 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Six5P70178 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.08□□□□□ -0.64
Six5P70178 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.08□□□□□ -0.64
Six5P70178 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.08□□□□□ -0.64
Six5P70178 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Six5P70178 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.07□□□□□ -0.64
Six5P70178 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.07□□□□□ -0.64
Six5P70178 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Six5P70178 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.07□□□□□ -0.64
Six5P70178 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.07□□□□□ -0.64
Six5P70178 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms