Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm8155-201ENSMUST00000216363 1612 ntBASIC8.4□□□□□ -1.06
Rpl39P62892 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Rpl39P62892 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rpl39P62892 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Rpl39P62892 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Gm18782-201ENSMUST00000209023 1399 ntBASIC8.4□□□□□ -1.06
Rpl39P62892 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Gm11439-201ENSMUST00000118598 409 ntBASIC8.4□□□□□ -1.06
Rpl39P62892 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Gm11918-201ENSMUST00000121660 179 ntBASIC8.4□□□□□ -1.06
Rpl39P62892 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC8.4□□□□□ -1.06
Rpl39P62892 Gm24644-201ENSMUST00000157114 139 ntBASIC8.4□□□□□ -1.06
Rpl39P62892 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC8.4□□□□□ -1.06
Rpl39P62892 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Rpl39P62892 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Mir6977-201ENSMUST00000184960 64 ntBASIC8.4□□□□□ -1.06
Rpl39P62892 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC8.4□□□□□ -1.06
Rpl39P62892 Gm43002-201ENSMUST00000200310 155 ntBASIC8.4□□□□□ -1.06
Rpl39P62892 Gm17931-201ENSMUST00000208132 634 ntBASIC8.4□□□□□ -1.06
Rpl39P62892 Gm45384-201ENSMUST00000210451 277 ntBASIC8.4□□□□□ -1.06
Rpl39P62892 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Rpl39P62892 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Rpl39P62892 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Rpl39P62892 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Gm29358-202ENSMUST00000187941 3227 ntBASIC8.4□□□□□ -1.07
Rpl39P62892 Gm28719-201ENSMUST00000187779 1757 ntBASIC8.4□□□□□ -1.07
Rpl39P62892 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Gm13135-201ENSMUST00000117628 3121 ntBASIC8.4□□□□□ -1.07
Rpl39P62892 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Rpl39P62892 AC124577.2-201ENSMUST00000217413 2420 ntBASIC8.4□□□□□ -1.07
Rpl39P62892 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Rpl39P62892 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
Rpl39P62892 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Rpl39P62892 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rpl39P62892 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC8.39□□□□□ -1.07
Rpl39P62892 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC8.39□□□□□ -1.07
Rpl39P62892 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Rpl39P62892 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Rpl39P62892 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Gm7642-201ENSMUST00000216345 1809 ntBASIC8.39□□□□□ -1.07
Rpl39P62892 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rpl39P62892 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC8.39□□□□□ -1.07
Rpl39P62892 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC8.39□□□□□ -1.07
Rpl39P62892 Mir1894-201ENSMUST00000122802 81 ntBASIC8.39□□□□□ -1.07
Rpl39P62892 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC8.39□□□□□ -1.07
Rpl39P62892 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rpl39P62892 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC8.39□□□□□ -1.07
Rpl39P62892 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC8.39□□□□□ -1.07
Rpl39P62892 Gm23984-201ENSMUST00000157139 203 ntBASIC8.39□□□□□ -1.07
Rpl39P62892 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Gm8738-201ENSMUST00000172606 329 ntBASIC8.39□□□□□ -1.07
Rpl39P62892 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl39P62892 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC8.39□□□□□ -1.07
Rpl39P62892 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms