Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.42□□□□□ -0.74
Lsm6P62313 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.42□□□□□ -0.74
Lsm6P62313 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.41□□□□□ -0.74
Lsm6P62313 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Lsm6P62313 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Gm15004-201ENSMUST00000119192 630 ntBASIC10.41□□□□□ -0.74
Lsm6P62313 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.41□□□□□ -0.74
Lsm6P62313 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.41□□□□□ -0.74
Lsm6P62313 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.41□□□□□ -0.74
Lsm6P62313 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.41□□□□□ -0.74
Lsm6P62313 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.41□□□□□ -0.74
Lsm6P62313 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Gm5705-201ENSMUST00000066241 711 ntBASIC10.41□□□□□ -0.74
Lsm6P62313 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Lsm6P62313 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Lsm6P62313 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Lsm6P62313 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.41□□□□□ -0.74
Lsm6P62313 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
Lsm6P62313 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lsm6P62313 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.4□□□□□ -0.74
Lsm6P62313 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Lsm6P62313 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Lsm6P62313 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Lsm6P62313 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Lsm6P62313 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Lsm6P62313 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Gm11700-201ENSMUST00000119409 403 ntBASIC10.4□□□□□ -0.74
Lsm6P62313 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.4□□□□□ -0.74
Lsm6P62313 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Gm26361-201ENSMUST00000158868 186 ntBASIC10.4□□□□□ -0.74
Lsm6P62313 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Lsm6P62313 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Lsm6P62313 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.4□□□□□ -0.74
Lsm6P62313 Gm44967-201ENSMUST00000207047 631 ntBASIC10.4□□□□□ -0.74
Lsm6P62313 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Lsm6P62313 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms