Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Gm12857-201ENSMUST00000117678 592 ntBASIC11.19□□□□□ -0.62
Nup43P59235 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.19□□□□□ -0.62
Nup43P59235 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Nup43P59235 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.19□□□□□ -0.62
Nup43P59235 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.19□□□□□ -0.62
Nup43P59235 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.19□□□□□ -0.62
Nup43P59235 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.19□□□□□ -0.62
Nup43P59235 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.19□□□□□ -0.62
Nup43P59235 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup43P59235 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.18□□□□□ -0.62
Nup43P59235 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Nup43P59235 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup43P59235 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup43P59235 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.18□□□□□ -0.62
Nup43P59235 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nup43P59235 Gm25881-201ENSMUST00000157783 103 ntBASIC11.18□□□□□ -0.62
Nup43P59235 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Nup43P59235 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup43P59235 Gm9192-201ENSMUST00000183221 985 ntBASIC11.18□□□□□ -0.62
Nup43P59235 Gm42660-201ENSMUST00000197733 947 ntBASIC11.18□□□□□ -0.62
Nup43P59235 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup43P59235 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup43P59235 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.18□□□□□ -0.62
Nup43P59235 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup43P59235 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup43P59235 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.18□□□□□ -0.62
Nup43P59235 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nup43P59235 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup43P59235 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nup43P59235 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup43P59235 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.17□□□□□ -0.62
Nup43P59235 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.17□□□□□ -0.62
Nup43P59235 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.17□□□□□ -0.62
Nup43P59235 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Nup43P59235 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.17□□□□□ -0.62
Nup43P59235 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.17□□□□□ -0.62
Nup43P59235 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nup43P59235 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nup43P59235 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nup43P59235 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Gm12196-201ENSMUST00000120954 262 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms