Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.34□□□□□ -0.27
Rrp1P56183 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Rrp1P56183 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rrp1P56183 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.33□□□□□ -0.27
Rrp1P56183 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rrp1P56183 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rrp1P56183 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rrp1P56183 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rrp1P56183 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rrp1P56183 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.33□□□□□ -0.28
Rrp1P56183 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.33□□□□□ -0.28
Rrp1P56183 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.33□□□□□ -0.28
Rrp1P56183 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rrp1P56183 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Rrp1P56183 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.33□□□□□ -0.28
Rrp1P56183 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.33□□□□□ -0.28
Rrp1P56183 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.33□□□□□ -0.28
Rrp1P56183 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rrp1P56183 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Rrp1P56183 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Rrp1P56183 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rrp1P56183 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.33□□□□□ -0.28
Rrp1P56183 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.33□□□□□ -0.28
Rrp1P56183 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.33□□□□□ -0.28
Rrp1P56183 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp1P56183 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.32□□□□□ -0.28
Rrp1P56183 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rrp1P56183 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rrp1P56183 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.32□□□□□ -0.28
Rrp1P56183 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.32□□□□□ -0.28
Rrp1P56183 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.32□□□□□ -0.28
Rrp1P56183 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Gm14644-201ENSMUST00000116671 647 ntBASIC13.32□□□□□ -0.28
Rrp1P56183 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.32□□□□□ -0.28
Rrp1P56183 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.32□□□□□ -0.28
Rrp1P56183 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Gm18054-201ENSMUST00000207539 555 ntBASIC13.32□□□□□ -0.28
Rrp1P56183 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.32□□□□□ -0.28
Rrp1P56183 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.32□□□□□ -0.28
Rrp1P56183 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.32□□□□□ -0.28
Rrp1P56183 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rrp1P56183 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.32□□□□□ -0.28
Rrp1P56183 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Rrp1P56183 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rrp1P56183 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.31□□□□□ -0.28
Rrp1P56183 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Rrp1P56183 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Rrp1P56183 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.31□□□□□ -0.28
Rrp1P56183 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms