Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Gm5187-201ENSMUST00000117317 991 ntBASIC11.3□□□□□ -0.6
Cdkn2bP55271 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Gm11793-201ENSMUST00000120433 981 ntBASIC11.3□□□□□ -0.6
Cdkn2bP55271 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Snora78-201ENSMUST00000158630 128 ntBASIC11.3□□□□□ -0.6
Cdkn2bP55271 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.3□□□□□ -0.6
Cdkn2bP55271 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Gm19287-201ENSMUST00000203190 358 ntBASIC11.3□□□□□ -0.6
Cdkn2bP55271 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.3□□□□□ -0.6
Cdkn2bP55271 Gm807-202ENSMUST00000224929 408 ntBASIC11.3□□□□□ -0.6
Cdkn2bP55271 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.3□□□□□ -0.6
Cdkn2bP55271 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.29□□□□□ -0.6
Cdkn2bP55271 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.29□□□□□ -0.6
Cdkn2bP55271 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.29□□□□□ -0.6
Cdkn2bP55271 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Gm10312-201ENSMUST00000078515 489 ntBASIC11.29□□□□□ -0.6
Cdkn2bP55271 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms