Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox3P53784 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sox3P53784 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sox3P53784 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox3P53784 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox3P53784 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox3P53784 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Sox3P53784 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.39□□□□□ -0.59
Sox3P53784 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox3P53784 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.39□□□□□ -0.59
Sox3P53784 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox3P53784 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.39□□□□□ -0.59
Sox3P53784 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.39□□□□□ -0.59
Sox3P53784 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Gm20392-201ENSMUST00000173047 701 ntBASIC11.39□□□□□ -0.59
Sox3P53784 Gm37028-201ENSMUST00000194276 107 ntBASIC11.39□□□□□ -0.59
Sox3P53784 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox3P53784 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox3P53784 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.39□□□□□ -0.59
Sox3P53784 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Sox3P53784 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Ginm1-202ENSMUST00000065124 300 ntBASIC11.39□□□□□ -0.59
Sox3P53784 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sox3P53784 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.39□□□□□ -0.59
Sox3P53784 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Sox3P53784 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sox3P53784 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox3P53784 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox3P53784 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.38□□□□□ -0.59
Sox3P53784 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sox3P53784 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox3P53784 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Sox3P53784 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Sox3P53784 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Gm25545-201ENSMUST00000122673 323 ntBASIC11.38□□□□□ -0.59
Sox3P53784 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox3P53784 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox3P53784 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.38□□□□□ -0.59
Sox3P53784 Gm28882-201ENSMUST00000185504 314 ntBASIC11.38□□□□□ -0.59
Sox3P53784 Gm37246-201ENSMUST00000192665 835 ntBASIC11.38□□□□□ -0.59
Sox3P53784 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Snora73b-201ENSMUST00000083419 205 ntBASIC11.38□□□□□ -0.59
Sox3P53784 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Sox3P53784 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox3P53784 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox3P53784 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sox3P53784 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox3P53784 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.37□□□□□ -0.59
Sox3P53784 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sox3P53784 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.37□□□□□ -0.59
Sox3P53784 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sox3P53784 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox3P53784 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Sox3P53784 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms