Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cux1P53564 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cux1P53564 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cux1P53564 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Gm37122-201ENSMUST00000195313 1567 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cux1P53564 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC17.9■□□□□ 0.46
Cux1P53564 Gm28424-201ENSMUST00000187393 1319 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Snord23-201ENSMUST00000116828 109 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Gm3828-201ENSMUST00000121817 257 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC17.9■□□□□ 0.46
Cux1P53564 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC17.9■□□□□ 0.46
Cux1P53564 Olfml3-204ENSMUST00000169286 874 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC17.9■□□□□ 0.46
Cux1P53564 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Mir6941-201ENSMUST00000184711 59 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Gm37284-201ENSMUST00000193607 539 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Gm43610-201ENSMUST00000199117 365 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Gm43249-201ENSMUST00000200464 458 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Cux1P53564 Id2-203ENSMUST00000222667 958 ntBASIC17.9■□□□□ 0.46
Cux1P53564 AC159002.1-201ENSMUST00000226714 924 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Gm26670-202ENSMUST00000226862 340 ntBASIC17.9■□□□□ 0.46
Cux1P53564 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cux1P53564 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cux1P53564 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cux1P53564 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC17.9■□□□□ 0.46
Cux1P53564 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cux1P53564 Gm6024-201ENSMUST00000117850 1558 ntBASIC17.9■□□□□ 0.46
Cux1P53564 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC17.89■□□□□ 0.46
Cux1P53564 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cux1P53564 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cux1P53564 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC17.89■□□□□ 0.46
Cux1P53564 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cux1P53564 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
Cux1P53564 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cux1P53564 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC17.89■□□□□ 0.45
Cux1P53564 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC17.89■□□□□ 0.45
Cux1P53564 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC17.89■□□□□ 0.45
Cux1P53564 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC17.89■□□□□ 0.45
Cux1P53564 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cux1P53564 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Gm17214-201ENSMUST00000164501 541 ntBASIC17.88■□□□□ 0.45
Cux1P53564 Gm6548-201ENSMUST00000167498 1165 ntBASIC17.88■□□□□ 0.45
Cux1P53564 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC17.88■□□□□ 0.45
Cux1P53564 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC17.88■□□□□ 0.45
Cux1P53564 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC17.88■□□□□ 0.45
Cux1P53564 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC17.88■□□□□ 0.45
Cux1P53564 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cux1P53564 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cux1P53564 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 CT009757.3-201ENSMUST00000223367 2320 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms