Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.25□□□□□ -0.61
RoraP51448 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.25□□□□□ -0.61
RoraP51448 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.25□□□□□ -0.61
RoraP51448 Gm8199-201ENSMUST00000121323 823 ntBASIC11.25□□□□□ -0.61
RoraP51448 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.25□□□□□ -0.61
RoraP51448 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.25□□□□□ -0.61
RoraP51448 Gm10051-201ENSMUST00000145209 414 ntBASIC11.25□□□□□ -0.61
RoraP51448 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.25□□□□□ -0.61
RoraP51448 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.25□□□□□ -0.61
RoraP51448 Gm6905-201ENSMUST00000205729 511 ntBASIC11.25□□□□□ -0.61
RoraP51448 Gm45770-201ENSMUST00000212105 616 ntBASIC11.25□□□□□ -0.61
RoraP51448 Gm9797-202ENSMUST00000218003 294 ntBASIC11.25□□□□□ -0.61
RoraP51448 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.25□□□□□ -0.61
RoraP51448 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.25□□□□□ -0.61
RoraP51448 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.25□□□□□ -0.61
RoraP51448 Gm29787-201ENSMUST00000222129 849 ntBASIC11.25□□□□□ -0.61
RoraP51448 Ginm1-202ENSMUST00000065124 300 ntBASIC11.25□□□□□ -0.61
RoraP51448 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Gm10288-201ENSMUST00000084614 537 ntBASIC11.25□□□□□ -0.61
RoraP51448 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.25□□□□□ -0.61
RoraP51448 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.25□□□□□ -0.61
RoraP51448 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.25□□□□□ -0.61
RoraP51448 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.24□□□□□ -0.61
RoraP51448 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.24□□□□□ -0.61
RoraP51448 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.24□□□□□ -0.61
RoraP51448 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Gm5706-201ENSMUST00000181525 993 ntBASIC11.24□□□□□ -0.61
RoraP51448 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.24□□□□□ -0.61
RoraP51448 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.24□□□□□ -0.61
RoraP51448 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.24□□□□□ -0.61
RoraP51448 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RoraP51448 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
RoraP51448 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.24□□□□□ -0.61
RoraP51448 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RoraP51448 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RoraP51448 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.23□□□□□ -0.61
RoraP51448 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.23□□□□□ -0.61
RoraP51448 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
RoraP51448 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
RoraP51448 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.23□□□□□ -0.61
RoraP51448 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms