Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Prox1P48437 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.38□□□□□ -0.59
Prox1P48437 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Prox1P48437 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.38□□□□□ -0.59
Prox1P48437 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.38□□□□□ -0.59
Prox1P48437 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.38□□□□□ -0.59
Prox1P48437 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Gm14660-201ENSMUST00000119809 575 ntBASIC11.38□□□□□ -0.59
Prox1P48437 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.38□□□□□ -0.59
Prox1P48437 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Gm17420-201ENSMUST00000164753 153 ntBASIC11.38□□□□□ -0.59
Prox1P48437 Gm27731-201ENSMUST00000185192 107 ntBASIC11.38□□□□□ -0.59
Prox1P48437 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Prox1P48437 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Prox1P48437 Gm10076-201ENSMUST00000073238 384 ntBASIC11.38□□□□□ -0.59
Prox1P48437 Gm8420-201ENSMUST00000097103 598 ntBASIC11.38□□□□□ -0.59
Prox1P48437 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Prox1P48437 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.38□□□□□ -0.59
Prox1P48437 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.38□□□□□ -0.59
Prox1P48437 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prox1P48437 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.37□□□□□ -0.59
Prox1P48437 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Prox1P48437 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.37□□□□□ -0.59
Prox1P48437 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Prox1P48437 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.37□□□□□ -0.59
Prox1P48437 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Gm11439-201ENSMUST00000118598 409 ntBASIC11.37□□□□□ -0.59
Prox1P48437 Gm16177-201ENSMUST00000120728 718 ntBASIC11.37□□□□□ -0.59
Prox1P48437 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Gm8738-201ENSMUST00000172606 329 ntBASIC11.37□□□□□ -0.59
Prox1P48437 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.37□□□□□ -0.59
Prox1P48437 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Prox1P48437 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.37□□□□□ -0.59
Prox1P48437 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.37□□□□□ -0.59
Prox1P48437 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.37□□□□□ -0.59
Prox1P48437 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.37□□□□□ -0.59
Prox1P48437 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Gm10478-201ENSMUST00000084451 396 ntBASIC11.37□□□□□ -0.59
Prox1P48437 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prox1P48437 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms