Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.59□□□□□ -0.55
Gli1P47806 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.59□□□□□ -0.55
Gli1P47806 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Gli1P47806 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.59□□□□□ -0.55
Gli1P47806 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Gli1P47806 Gm2546-201ENSMUST00000182630 991 ntBASIC11.59□□□□□ -0.55
Gli1P47806 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.59□□□□□ -0.55
Gli1P47806 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.59□□□□□ -0.55
Gli1P47806 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Gli1P47806 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Gli1P47806 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Gli1P47806 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gli1P47806 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Gli1P47806 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Gli1P47806 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.58□□□□□ -0.56
Gli1P47806 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Gli1P47806 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.58□□□□□ -0.56
Gli1P47806 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Gli1P47806 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.58□□□□□ -0.56
Gli1P47806 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Gli1P47806 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Gm11531-201ENSMUST00000117614 555 ntBASIC11.58□□□□□ -0.56
Gli1P47806 Gm12217-201ENSMUST00000118858 696 ntBASIC11.58□□□□□ -0.56
Gli1P47806 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.58□□□□□ -0.56
Gli1P47806 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Gli1P47806 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Gm8018-201ENSMUST00000173536 789 ntBASIC11.58□□□□□ -0.56
Gli1P47806 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.58□□□□□ -0.56
Gli1P47806 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.58□□□□□ -0.56
Gli1P47806 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.58□□□□□ -0.56
Gli1P47806 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Gli1P47806 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.58□□□□□ -0.56
Gli1P47806 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.58□□□□□ -0.56
Gli1P47806 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Gli1P47806 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Gli1P47806 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.58□□□□□ -0.56
Gli1P47806 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gli1P47806 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.57□□□□□ -0.56
Gli1P47806 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.57□□□□□ -0.56
Gli1P47806 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms