Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vps4bP46467 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps4bP46467 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vps4bP46467 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps4bP46467 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps4bP46467 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps4bP46467 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.02□□□□□ -0.48
Vps4bP46467 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Vps4bP46467 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps4bP46467 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps4bP46467 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps4bP46467 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Vps4bP46467 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vps4bP46467 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps4bP46467 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vps4bP46467 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps4bP46467 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps4bP46467 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vps4bP46467 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vps4bP46467 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.02□□□□□ -0.49
Vps4bP46467 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps4bP46467 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.02□□□□□ -0.49
Vps4bP46467 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps4bP46467 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.02□□□□□ -0.49
Vps4bP46467 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.02□□□□□ -0.49
Vps4bP46467 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vps4bP46467 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vps4bP46467 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.02□□□□□ -0.49
Vps4bP46467 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.02□□□□□ -0.49
Vps4bP46467 Gm3096-201ENSMUST00000185770 364 ntBASIC12.02□□□□□ -0.49
Vps4bP46467 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.02□□□□□ -0.49
Vps4bP46467 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.02□□□□□ -0.49
Vps4bP46467 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vps4bP46467 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps4bP46467 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.02□□□□□ -0.49
Vps4bP46467 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps4bP46467 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.02□□□□□ -0.49
Vps4bP46467 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.02□□□□□ -0.49
Vps4bP46467 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps4bP46467 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
Vps4bP46467 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vps4bP46467 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vps4bP46467 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps4bP46467 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vps4bP46467 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Vps4bP46467 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps4bP46467 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps4bP46467 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps4bP46467 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Vps4bP46467 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps4bP46467 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Vps4bP46467 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.01□□□□□ -0.49
Vps4bP46467 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vps4bP46467 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.01□□□□□ -0.49
Vps4bP46467 Gm24255-201ENSMUST00000104481 128 ntBASIC12.01□□□□□ -0.49
Vps4bP46467 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Vps4bP46467 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Gm12997-201ENSMUST00000120207 640 ntBASIC12.01□□□□□ -0.49
Vps4bP46467 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.01□□□□□ -0.49
Vps4bP46467 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps4bP46467 Gm22902-201ENSMUST00000158488 302 ntBASIC12.01□□□□□ -0.49
Vps4bP46467 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Vps4bP46467 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.01□□□□□ -0.49
Vps4bP46467 Gm37259-201ENSMUST00000193903 849 ntBASIC12.01□□□□□ -0.49
Vps4bP46467 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps4bP46467 Rps4l-202ENSMUST00000204242 789 ntBASIC12.01□□□□□ -0.49
Vps4bP46467 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vps4bP46467 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.01□□□□□ -0.49
Vps4bP46467 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vps4bP46467 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps4bP46467 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.01□□□□□ -0.49
Vps4bP46467 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.01□□□□□ -0.49
Vps4bP46467 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps4bP46467 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps4bP46467 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vps4bP46467 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps4bP46467 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vps4bP46467 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vps4bP46467 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms