Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm23045-201ENSMUST00000175041 96 ntBASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm4310-201ENSMUST00000177847 889 ntBASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm19287-201ENSMUST00000203190 358 ntBASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.22□□□□□ -0.61
Nkx2-6P43688 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm6867-201ENSMUST00000219165 425 ntBASIC11.22□□□□□ -0.61
Nkx2-6P43688 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.22□□□□□ -0.61
Nkx2-6P43688 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.22□□□□□ -0.61
Nkx2-6P43688 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.21□□□□□ -0.61
Nkx2-6P43688 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.21□□□□□ -0.61
Nkx2-6P43688 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Gm22920-201ENSMUST00000102175 109 ntBASIC11.21□□□□□ -0.61
Nkx2-6P43688 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Gm13888-201ENSMUST00000119148 422 ntBASIC11.21□□□□□ -0.61
Nkx2-6P43688 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.21□□□□□ -0.61
Nkx2-6P43688 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.21□□□□□ -0.61
Nkx2-6P43688 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Gm21092-201ENSMUST00000178995 955 ntBASIC11.21□□□□□ -0.61
Nkx2-6P43688 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkx2-6P43688 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.21□□□□□ -0.61
Nkx2-6P43688 Gm9132-201ENSMUST00000210182 832 ntBASIC11.21□□□□□ -0.61
Nkx2-6P43688 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-6P43688 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.21□□□□□ -0.61
Nkx2-6P43688 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-6P43688 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-6P43688 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-6P43688 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-6P43688 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-6P43688 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-6P43688 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-6P43688 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-6P43688 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Nkx2-6P43688 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-6P43688 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.2□□□□□ -0.62
Nkx2-6P43688 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.2□□□□□ -0.62
Nkx2-6P43688 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.2□□□□□ -0.62
Nkx2-6P43688 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Gm13916-201ENSMUST00000117368 628 ntBASIC11.2□□□□□ -0.62
Nkx2-6P43688 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms