Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.19□□□□□ -0.46
HttP42859 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
HttP42859 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
HttP42859 Gm44236-201ENSMUST00000204492 513 ntBASIC12.19□□□□□ -0.46
HttP42859 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.19□□□□□ -0.46
HttP42859 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Gm19228-201ENSMUST00000214030 717 ntBASIC12.19□□□□□ -0.46
HttP42859 AC140314.1-201ENSMUST00000219549 554 ntBASIC12.19□□□□□ -0.46
HttP42859 AC154433.1-201ENSMUST00000224401 1183 ntBASIC12.19□□□□□ -0.46
HttP42859 AC133517.1-201ENSMUST00000225825 594 ntBASIC12.19□□□□□ -0.46
HttP42859 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.19□□□□□ -0.46
HttP42859 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HttP42859 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HttP42859 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Gm12774-201ENSMUST00000117881 416 ntBASIC12.18□□□□□ -0.46
HttP42859 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.18□□□□□ -0.46
HttP42859 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.18□□□□□ -0.46
HttP42859 Gm45258-201ENSMUST00000210042 853 ntBASIC12.18□□□□□ -0.46
HttP42859 CT030035.1-201ENSMUST00000223964 935 ntBASIC12.18□□□□□ -0.46
HttP42859 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
HttP42859 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.18□□□□□ -0.46
HttP42859 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
HttP42859 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.18□□□□□ -0.46
HttP42859 Gm23129-201ENSMUST00000104259 132 ntBASIC12.18□□□□□ -0.46
HttP42859 Gm6238-201ENSMUST00000120999 465 ntBASIC12.18□□□□□ -0.46
HttP42859 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Gm44498-201ENSMUST00000199509 111 ntBASIC12.18□□□□□ -0.46
HttP42859 AC159006.3-201ENSMUST00000226918 664 ntBASIC12.18□□□□□ -0.46
HttP42859 Gm23458-201ENSMUST00000083257 169 ntBASIC12.18□□□□□ -0.46
HttP42859 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
HttP42859 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
HttP42859 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
HttP42859 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HttP42859 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HttP42859 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HttP42859 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.17□□□□□ -0.46
HttP42859 Gm44173-201ENSMUST00000204316 132 ntBASIC12.17□□□□□ -0.46
HttP42859 AC241616.1-201ENSMUST00000213741 166 ntBASIC12.17□□□□□ -0.46
HttP42859 AC102327.1-201ENSMUST00000226389 742 ntBASIC12.17□□□□□ -0.46
HttP42859 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.17□□□□□ -0.46
HttP42859 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HttP42859 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC12.17□□□□□ -0.46
HttP42859 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC12.17□□□□□ -0.46
HttP42859 Gm4960-201ENSMUST00000182928 1001 ntBASIC12.17□□□□□ -0.46
HttP42859 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.17□□□□□ -0.46
HttP42859 Gm27149-201ENSMUST00000184716 1266 ntBASIC12.17□□□□□ -0.46
HttP42859 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.17□□□□□ -0.46
HttP42859 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.17□□□□□ -0.46
HttP42859 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
HttP42859 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HttP42859 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Gm7815-201ENSMUST00000196104 832 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms