Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
TfamP40630 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
TfamP40630 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.46□□□□□ -0.57
TfamP40630 Gm23270-201ENSMUST00000104055 131 ntBASIC11.46□□□□□ -0.57
TfamP40630 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 Gm11222-201ENSMUST00000119005 738 ntBASIC11.46□□□□□ -0.57
TfamP40630 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 Gm14441-201ENSMUST00000121960 540 ntBASIC11.46□□□□□ -0.57
TfamP40630 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
TfamP40630 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TfamP40630 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.46□□□□□ -0.57
TfamP40630 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.46□□□□□ -0.57
TfamP40630 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TfamP40630 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
TfamP40630 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.46□□□□□ -0.58
TfamP40630 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
TfamP40630 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TfamP40630 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.46□□□□□ -0.58
TfamP40630 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
TfamP40630 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
TfamP40630 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TfamP40630 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.46□□□□□ -0.58
TfamP40630 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.45□□□□□ -0.58
TfamP40630 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
TfamP40630 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TfamP40630 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TfamP40630 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TfamP40630 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TfamP40630 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TfamP40630 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TfamP40630 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TfamP40630 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Gm12015-201ENSMUST00000117065 843 ntBASIC11.45□□□□□ -0.58
TfamP40630 Gm13392-201ENSMUST00000117708 150 ntBASIC11.45□□□□□ -0.58
TfamP40630 Gm12241-201ENSMUST00000118330 726 ntBASIC11.45□□□□□ -0.58
TfamP40630 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.45□□□□□ -0.58
TfamP40630 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Gm3096-201ENSMUST00000185770 364 ntBASIC11.45□□□□□ -0.58
TfamP40630 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.45□□□□□ -0.58
TfamP40630 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.45□□□□□ -0.58
TfamP40630 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.45□□□□□ -0.58
TfamP40630 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.45□□□□□ -0.58
TfamP40630 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Gm10478-201ENSMUST00000084451 396 ntBASIC11.45□□□□□ -0.58
TfamP40630 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
TfamP40630 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
TfamP40630 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TfamP40630 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TfamP40630 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.44□□□□□ -0.58
TfamP40630 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
TfamP40630 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
TfamP40630 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
TfamP40630 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.44□□□□□ -0.58
TfamP40630 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms