Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.36■□□□□ 0.37
Chd1P40201 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Chd1P40201 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.36■□□□□ 0.37
Chd1P40201 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC17.35■□□□□ 0.37
Chd1P40201 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC17.35■□□□□ 0.37
Chd1P40201 Mrip-ps-201ENSMUST00000184613 940 ntBASIC17.35■□□□□ 0.37
Chd1P40201 Gm36980-201ENSMUST00000195643 622 ntBASIC17.35■□□□□ 0.37
Chd1P40201 AC118639.1-202ENSMUST00000226957 653 ntBASIC17.35■□□□□ 0.37
Chd1P40201 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chd1P40201 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC17.35■□□□□ 0.37
Chd1P40201 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Chd1P40201 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Chd1P40201 Gm23062-201ENSMUST00000102349 110 ntBASIC17.35■□□□□ 0.37
Chd1P40201 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Chd1P40201 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Gm13505-201ENSMUST00000121666 817 ntBASIC17.35■□□□□ 0.37
Chd1P40201 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC17.35■□□□□ 0.37
Chd1P40201 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC17.35■□□□□ 0.37
Chd1P40201 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Gm3527-201ENSMUST00000198905 460 ntBASIC17.35■□□□□ 0.37
Chd1P40201 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Chd1P40201 Gm44304-201ENSMUST00000200509 145 ntBASIC17.35■□□□□ 0.37
Chd1P40201 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Gm37122-201ENSMUST00000195313 1567 ntBASIC17.35■□□□□ 0.37
Chd1P40201 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1P40201 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Chd1P40201 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Chd1P40201 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Gm16288-201ENSMUST00000137940 367 ntBASIC17.34■□□□□ 0.37
Chd1P40201 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Mir3060-201ENSMUST00000175339 83 ntBASIC17.34■□□□□ 0.37
Chd1P40201 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Gm38349-201ENSMUST00000195732 462 ntBASIC17.34■□□□□ 0.37
Chd1P40201 Gm8828-201ENSMUST00000196786 1290 ntBASIC17.34■□□□□ 0.37
Chd1P40201 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Chd1P40201 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Chd1P40201 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Chd1P40201 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Chd1P40201 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Gm18986-201ENSMUST00000216029 1986 ntBASIC17.34■□□□□ 0.37
Chd1P40201 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1P40201 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1P40201 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1P40201 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1P40201 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1P40201 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1P40201 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC17.33■□□□□ 0.37
Chd1P40201 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Chd1P40201 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Chd1P40201 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1P40201 Gm5764-201ENSMUST00000118817 885 ntBASIC17.33■□□□□ 0.37
Chd1P40201 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC17.33■□□□□ 0.37
Chd1P40201 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC17.33■□□□□ 0.37
Chd1P40201 Gm9574-201ENSMUST00000173127 845 ntBASIC17.33■□□□□ 0.37
Chd1P40201 Gm26943-201ENSMUST00000182295 957 ntBASIC17.33■□□□□ 0.37
Chd1P40201 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC17.33■□□□□ 0.37
Chd1P40201 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1P40201 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1P40201 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1P40201 Gm45416-201ENSMUST00000209713 2201 ntBASIC17.33■□□□□ 0.37
Chd1P40201 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms