Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Rmrp-201ENSMUST00000157463 271 ntBASIC10.2□□□□□ -0.78
Slc6a1P31648 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Slc6a1P31648 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Gm27514-201ENSMUST00000183692 110 ntBASIC10.2□□□□□ -0.78
Slc6a1P31648 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Gm8099-201ENSMUST00000200510 742 ntBASIC10.2□□□□□ -0.78
Slc6a1P31648 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.2□□□□□ -0.78
Slc6a1P31648 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.2□□□□□ -0.78
Slc6a1P31648 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.19□□□□□ -0.78
Slc6a1P31648 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.19□□□□□ -0.78
Slc6a1P31648 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Gm11637-201ENSMUST00000120601 592 ntBASIC10.19□□□□□ -0.78
Slc6a1P31648 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Gm43002-201ENSMUST00000200310 155 ntBASIC10.19□□□□□ -0.78
Slc6a1P31648 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.19□□□□□ -0.78
Slc6a1P31648 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.19□□□□□ -0.78
Slc6a1P31648 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.19□□□□□ -0.78
Slc6a1P31648 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.19□□□□□ -0.78
Slc6a1P31648 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Slc6a1P31648 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Slc6a1P31648 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Slc6a1P31648 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.18□□□□□ -0.78
Slc6a1P31648 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Slc6a1P31648 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Slc6a1P31648 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms