Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.52□□□□□ -0.56
Hoxc11P31313 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.52□□□□□ -0.56
Hoxc11P31313 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc11P31313 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc11P31313 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc11P31313 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc11P31313 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.52□□□□□ -0.56
Hoxc11P31313 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc11P31313 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc11P31313 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.52□□□□□ -0.57
Hoxc11P31313 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.52□□□□□ -0.57
Hoxc11P31313 Gm23251-201ENSMUST00000103773 110 ntBASIC11.52□□□□□ -0.57
Hoxc11P31313 Gm26286-201ENSMUST00000104166 134 ntBASIC11.52□□□□□ -0.57
Hoxc11P31313 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Gm7851-201ENSMUST00000117574 323 ntBASIC11.52□□□□□ -0.57
Hoxc11P31313 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.52□□□□□ -0.57
Hoxc11P31313 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Gm7722-201ENSMUST00000120646 741 ntBASIC11.52□□□□□ -0.57
Hoxc11P31313 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.52□□□□□ -0.57
Hoxc11P31313 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
Hoxc11P31313 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Gm3332-201ENSMUST00000189337 928 ntBASIC11.52□□□□□ -0.57
Hoxc11P31313 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Gm807-202ENSMUST00000224929 408 ntBASIC11.52□□□□□ -0.57
Hoxc11P31313 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Ntng1-201ENSMUST00000051253 327 ntBASIC11.52□□□□□ -0.57
Hoxc11P31313 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc11P31313 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Hoxc11P31313 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc11P31313 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc11P31313 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc11P31313 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.51□□□□□ -0.57
Hoxc11P31313 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxc11P31313 Gm14724-201ENSMUST00000118400 537 ntBASIC11.51□□□□□ -0.57
Hoxc11P31313 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Gm44882-201ENSMUST00000205702 802 ntBASIC11.51□□□□□ -0.57
Hoxc11P31313 Gm4607-201ENSMUST00000206649 577 ntBASIC11.51□□□□□ -0.57
Hoxc11P31313 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.51□□□□□ -0.57
Hoxc11P31313 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc11P31313 Gm45118-201ENSMUST00000208928 825 ntBASIC11.51□□□□□ -0.57
Hoxc11P31313 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.51□□□□□ -0.57
Hoxc11P31313 Gm29787-201ENSMUST00000222129 849 ntBASIC11.51□□□□□ -0.57
Hoxc11P31313 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.51□□□□□ -0.57
Hoxc11P31313 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hoxc11P31313 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hoxc11P31313 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc11P31313 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc11P31313 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc11P31313 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms